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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9158680_9158855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9158680 - 9158855

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CCCGGCTGATCC

Flanking Amino Acid:

DVYIYKRSFKTADIGLTENS

Intron Amino Acid Position:

1814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

83.8

0.76

0.9

81.4

30.6

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

39.3

-0.8

41.94

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008215

9081077 - 9163097

82021

ENSAPLT00000044960

9087149 - 9163490

76342