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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9159034_9159674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9159034 - 9159674

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTACAC

U12 Branch Point Sequence:

GCTGTTACACCT

Flanking Amino Acid:

ILWQQAARNKEIRMQEMVSM

Intron Amino Acid Position:

1873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

73.8

Major BPS

55.1

0.13

1.2

66.7

Major PPT

83.8

0.76

0.7

81.1

24.1

Minor 5ss

43.1

-0.8

58.5

46.3

Minor BPS

38.9

-0.7

1.9

52.64

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044960

9087149 - 9163490

76342

ENSAPLT00000008215

9081077 - 9163097

82021