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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9161031_9161601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9161031 - 9161601

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CTCTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TAACCCTGTACT

Flanking Amino Acid:

RFTNSQYISAKAGQVTISPS

Intron Amino Acid Position:

2066

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

54.2

0.21

1.8

73.12

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044960

9087149 - 9163490

76342

ENSAPLT00000008215

9081077 - 9163097

82021