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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9178948_9179317_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9178948 - 9179317

Intron Length:
370

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACTATAG

5'SS Class:
major

3'SS Sequence:
CCTTGGTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTGAC

U12 Branch Point Sequence:
TGGGACCTGACA

Flanking Amino Acid:
ELINALRIYRGSGAVGRGAG

Intron Amino Acid Position:
187

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
61.6
39.7

Major BPS
60.1
0.25
1
51
35.6

Major PPT
69
0.43
1.1
64.3
41.5

Minor 5ss
36.3
-1.6
3.2
47.2
48.1

Minor BPS
45.8
-0.3
1.9
56.98
42.1

Associated Gene:

Gene:
KCTD19

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9164987 - 9184762
19776

9164987 - 9184103
19117