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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9180567_9181173_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9180567 - 9181173

Intron Length:
607

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTTGCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TTTTCTGCAACT

Flanking Amino Acid:
EVSPKIKAFTGLHESAPLGL

Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98.4
1.14
0.6
94.3
17.7

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
77.9
0.63
0.8
73
37.3

Minor 5ss
38.6
-1.3
3.4
57.8
46.8

Minor BPS
61.4
0.44
2.2
87.98
37.6

Associated Gene:

Gene:
KCTD19

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9164987 - 9184762
19776

9164987 - 9184103
19117