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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9212430_9213906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9212430 - 9213906

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCATGTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCATCTTGTACA

Flanking Amino Acid:

EDFTTVTSGKGFSKLYIHND

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

71.6

0.54

33.1

Major PPT

68.2

0.41

65.1

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

52.4

0.07

1.8

64.69

41.9

Associated Gene:

Gene:

ZDHHC1

Ensembl Gene ID:

ENSAPLG00000009433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031116

9209636 - 9228113

18478

ENSAPLT00000009849

9209636 - 9228113

18478