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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9236987_9237088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9236987 - 9237088

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

ATCCTCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCACAT

U12 Branch Point Sequence:

TCCTCCCTACAG

Flanking Amino Acid:

GTSCQSPVYTYWVTLSNSSF

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.2

61.4

38.9

Major BPS

56.3

0.16

62.9

34.3

Major PPT

76.7

0.6

0.8

69.4

30.6

Minor 5ss

35.5

-1.6

3.5

53.9

43.4

Minor BPS

45.9

-0.4

2.1

52.92

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017932

9234842 - 9237870

3029