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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9241656_9243387_F

Intron Information:

Intron Rank:

129985

Intron Class:

major

Intron Phase:

Intron Coordinates:

9241656 - 9243387

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CACTGCTCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

79.7

0.74

79.6

35.6

Major PPT

80.1

0.68

0.7

77.6

24.3

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

43.1

-0.4

2.1

56.68

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020222

9240871 - 9244470

3600

ENSAPLT00000018061

9240871 - 9244904

4034