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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9262914_9263876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9262914 - 9263876

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTTTCCTTAATT

Flanking Amino Acid:

LLFANAGMNQFKPIFLNTID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

84.1

0.77

0.8

81.1

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

88.9

1.3

0.9

95.75

Associated Gene:

Gene:

AARS1

Ensembl Gene ID:

ENSAPLG00000008519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008909

9248363 - 9264077

15715