Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9267474_9267663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9267474 - 9267663

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGACTTCTAACC

Flanking Amino Acid:

CRDPDGPRGKALRELSAQHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

81.3

0.7

0.8

72.7

37.6

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

50.9

0.01

1.6

62.01

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038448

9267330 - 9271507

4178