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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9270377_9270656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9270377 - 9270656

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCGAG

5'SS Class:

major

3'SS Sequence:

GTCCTTGTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCTGTATTAACA

Flanking Amino Acid:

NVVGPLQVTKEFLPLLEKAA

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

64.9

41.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

69.2

0.43

1.1

68.4

42.1

Minor 5ss

41.8

-0.9

3.2

54.5

49.7

Minor BPS

61.5

0.36

1.7

71.68

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038448

9267330 - 9271507

4178