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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9270816_9271061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9270816 - 9271061

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGCAT

U12 Branch Point Sequence:

TGAGCCCAATGT

Flanking Amino Acid:

APMYPYRASKAAQNMVTRCL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

-0

1.5

60.7

45.9

Major PPT

75.3

0.57

0.9

65.6

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

37.2

-0.8

2.3

53.92

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038448

9267330 - 9271507

4178

ENSAPLT00000031636

9267330 - 9271507

4178