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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9271173_9271393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9271173 - 9271393

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGC

5'SS Class:

major

3'SS Sequence:

TCCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

ATGGCAGTGACA

Flanking Amino Acid:

WVKTDMGTEQAPMTVERSVQ

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

59.4

40.4

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

84.9

0.79

0.7

80.1

25.2

Minor 5ss

43.2

-0.7

3.1

59.3

45.4

Minor BPS

43.9

-0.4

2.3

57.37

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038448

9267330 - 9271507

4178

ENSAPLT00000031636

9267330 - 9271507

4178