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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9272329_9272608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9272329 - 9272608

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CCACCCTGATCC

Flanking Amino Acid:

GQAISYRCSKAALNMLTKCQ

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

83.4

0.75

0.8

77.3

31.4

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

47.5

-0.2

1.8

53.61

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008674

9271995 - 9273913

1919