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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9280620_9281208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9280620 - 9281208

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTGTTCACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTCTTATCC

Flanking Amino Acid:

SVLQKIKELWLRSASLGTAP

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

80.5

0.69

0.9

74.9

34.7

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

62.2

0.36

1.6

71.17

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023719

9276502 - 9285593

9092

ENSAPLT00000008634

9276654 - 9285593

8940