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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9284729_9284987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9284729 - 9284987

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CCCTTCTCATCC

Flanking Amino Acid:

PELCQQIRSVRISKAMLKWA

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

47.1

-0.2

1.8

53.26

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023719

9276502 - 9285593

9092

ENSAPLT00000008634

9276654 - 9285593

8940