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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9292171_9292555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9292171 - 9292555

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTAATGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

GATAATTTAAGC

Flanking Amino Acid:

GDLSAAQCKLAESLPTHGLD

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

65.6

0.35

61.8

44.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

48.6

-0.1

1.8

58.18

40.2

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008209

9286440 - 9303330

16891

ENSAPLT00000033131

9286389 - 9303330

16942