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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9292644_9292922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9292644 - 9292922

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGGGTGAT

5'SS Class:

major

3'SS Sequence:

TCTCTGTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GCGTCCCCAACG

Flanking Amino Acid:

QMVTDVFSKLNEIKLSVTAA

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

71.2

34.5

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

0.67

0.8

72.1

37.9

Minor 5ss

29.2

-2.4

3.5

39.2

Minor BPS

47.9

-0.2

53.29

46.9

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891