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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9294239_9294356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9294239 - 9294356

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATCCAT

U12 Branch Point Sequence:

CATCCATCCATC

Flanking Amino Acid:

PERTEEAVHKLQSCLARNQM

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

57.2

0.18

1.3

68.1

Major PPT

74.9

0.56

0.9

68.5

31.8

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

41.4

-0.6

2.1

50.54

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891