Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9295785_9295878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9295785 - 9295878

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCGTGCG

5'SS Class:

major

3'SS Sequence:

GCCTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTAAC

U12 Branch Point Sequence:

ACGCGCGTAACC

Flanking Amino Acid:

SLGKNFNIKSKDGLLDVLHR

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

59.7

39.5

Major BPS

47.7

-0.1

1.4

49.3

42.6

Major PPT

71.4

0.48

0.8

65.1

30.6

Minor 5ss

28.2

-2.5

3.2

32.1

36.2

Minor BPS

44.2

-0.4

2.3

53.64

44.2

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891