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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9296826_9296960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9296826 - 9296960

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGGGAT

5'SS Class:

major

3'SS Sequence:

GGGACTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GCTCTGGGGACT

Flanking Amino Acid:

AGTKLPPDAVRAMLQGLAYN

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

70.8

34.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

68.5

0.42

57.8

47.2

Minor 5ss

31.5

-2.1

3.6

45.4

49.7

Minor BPS

-1

2.5

53.18

42.2

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891