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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9298461_9298534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9298461 - 9298534

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

CGTGCCGGGATC

Flanking Amino Acid:

TKLSCKDFRLNQEIAEQLLY

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

80.4

0.68

0.8

74.3

30.8

Minor 5ss

27.7

-2.6

29.3

Minor BPS

41.8

-0.6

2.1

50.42

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891