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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9301026_9301134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9301026 - 9301134

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TGCATCCCAACC

Flanking Amino Acid:

YVVPAMLPVRVHSSFSFLEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

82.3

0.73

0.7

76.8

25.2

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

-0.3

1.9

56.75

41.4

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891