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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9301498_9302338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9301498 - 9302338

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCGGTCTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAACAC

U12 Branch Point Sequence:

GAGACGCCAACA

Flanking Amino Acid:

SPGGIPAELQEGITASLGAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

44.5

-0.3

46.6

34.6

Major PPT

74.3

0.55

0.9

64.7

41.3

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

38.7

-0.8

2.3

47.57

41.7

Associated Gene:

Gene:

CARMIL2

Ensembl Gene ID:

ENSAPLG00000007850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033131

9286389 - 9303330

16942

ENSAPLT00000008209

9286440 - 9303330

16891