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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9311423_9312529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9311423 - 9312529

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TCTGCCCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TCTCCCTCACCC

Flanking Amino Acid:

KAATQTKQSQPAAIIQVEDQ

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.4

42.7

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

0.56

0.8

66.2

35.8

Minor 5ss

34.5

-1.8

2.9

36.7

40.6

Minor BPS

54.8

0.13

1.9

68.24

43.3

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041542

9311071 - 9340019

28949

ENSAPLT00000029594

9311071 - 9340019

28949

ENSAPLT00000007769

9311071 - 9328862

17792