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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9316356_9317962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9316356 - 9317962

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAA

U12 Branch Point Sequence:

TCGTGGTTAAAG

Flanking Amino Acid:

DTVIARKSDLGVHLRKQHSY

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

77.9

36.9

Major BPS

57.4

0.19

1.3

61.7

43.1

Major PPT

76.7

0.6

0.8

69.5

36.8

Minor 5ss

45.9

-0.4

2.5

54.6

42.8

Minor BPS

-0.5

2.5

51.84

48.4

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041542

9311071 - 9340019

28949

ENSAPLT00000029594

9311071 - 9340019

28949

ENSAPLT00000007769

9311071 - 9328862

17792