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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9318113_9318915_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9318113 - 9318915

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTGTTG

5'SS Class:

weak_major

3'SS Sequence:

TCTGCTACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CTTTCTGCTACT

Flanking Amino Acid:

KLKRHMRTHSGEKPYECYIC

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

57.6

41.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

65.2

0.34

1.1

35.3

Minor 5ss

46.6

-0.3

3.1

60.9

Minor BPS

45.6

-0.2

2.4

71.79

45.3

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029594

9311071 - 9340019

28949

ENSAPLT00000007769

9311071 - 9328862

17792

ENSAPLT00000041542

9311071 - 9340019

28949