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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9319037_9320505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9319037 - 9320505

Intron Length:

1469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TCTATGCTAACT

Flanking Amino Acid:

CSMCDYASVEVSKLKRHIRS

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.7

34.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

80.8

0.69

0.9

76.9

37.3

Minor 5ss

45.6

-0.5

2.5

57.3

47.4

Minor BPS

47.7

-0.1

2.3

72.74

44.1

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041542

9311071 - 9340019

28949

ENSAPLT00000029594

9311071 - 9340019

28949

ENSAPLT00000007769

9311071 - 9328862

17792