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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9321488_9322150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9321488 - 9322150

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTGGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TAAAGATTATTT

Flanking Amino Acid:

PPKPTKIKKKGVKKTFQCEL

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

0.32

1.1

64.9

41.3

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

42.9

-0.4

2.1

60.16

43.1

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041542

9311071 - 9340019

28949

ENSAPLT00000029594

9311071 - 9340019

28949

ENSAPLT00000007769

9311071 - 9328862

17792