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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9337937_9339869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9337937 - 9339869

Intron Length:

1933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTACCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGCTGTCTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

68.6

0.42

60.5

40.5

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

-0.5

2.2

56.02

43.4

Associated Gene:

Gene:

CTCF

Ensembl Gene ID:

ENSAPLG00000007458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029594

9311071 - 9340019

28949