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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9356513_9357556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9356513 - 9357556

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

CTTTGCTTCACT

Flanking Amino Acid:

EAAKQSLMLCGEDGKSAHRR

Intron Amino Acid Position:

1098

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

61.3

0.28

52.7

34.2

Major PPT

73.1

0.52

65.3

41.1

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

61.3

0.44

2.2

83.33

44.1

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520