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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9357648_9358047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9357648 - 9358047

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CAGTGCTCAGCC

Flanking Amino Acid:

AGCAALGCLKAKESIEQLVY

Intron Amino Acid Position:

1094

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

78.2

0.63

0.7

72.8

25.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

43.7

-0.5

2.1

51.59

45.3

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520