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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9358915_9358993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9358915 - 9358993

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

ACAGCCTGACCC

Flanking Amino Acid:

NERHPGLADAVCVKLVEDVL

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

68.2

0.41

0.8

29.2

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

47.1

-0.2

1.8

54.29

43.4

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118