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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9359156_9359234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9359156 - 9359234

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGCG

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

GGAGGCTTGACA

Flanking Amino Acid:

RLEAATSAAGVVQFSTRKDG

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.8

40.7

Major BPS

56.2

0.15

1.3

44.3

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

28.9

-2.4

3.5

38.5

46.7

Minor BPS

48.5

-0.1

1.9

56.62

42.4

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020851

9355896 - 9374415

18520

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425