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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9362162_9362389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9362162 - 9362389

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTCCCCTCACCT

Flanking Amino Acid:

TLKLSLEVTWNPFDKDDQPS

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.8

0.63

0.7

72.6

25.5

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

50.4

0.09

1.9

69.41

47.1

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118