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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9362941_9363014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9362941 - 9363014

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACGG

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTGTCCTGACGT

Flanking Amino Acid:

QLGEFHVRMKGLAGFARLCA

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

57.3

47.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

36.9

-1.5

3.1

48.4

47.1

Minor BPS

53.3

0.18

2.1

76.53

45.9

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520