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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9363510_9363799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9363510 - 9363799

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

AGCCTCTCACGC

Flanking Amino Acid:

RLGFLYDLDKQVKSIERFLR

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

72.7

0.56

30.1

Major PPT

88.6

0.87

0.7

83.9

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

39.5

-0.8

1.9

42.5

38.3

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118

ENSAPLT00000035445

9355896 - 9367320

11425