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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9364700_9366889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9364700 - 9366889

Intron Length:

2190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCTCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCACCCTGACCG

Flanking Amino Acid:

GVNSTADRPFRNLSPFTPTV

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

68.5

0.42

61.4

40.1

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

48.7

-0.2

1.8

54.76

45.7

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007503

9355896 - 9367320

11425

ENSAPLT00000036370

9355896 - 9371013

15118

ENSAPLT00000035445

9355896 - 9367320

11425

ENSAPLT00000027926

9355896 - 9367320

11425

ENSAPLT00000020851

9355896 - 9374415

18520