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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9367017_9374380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9367017 - 9374380

Intron Length:

7364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCATGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGCTGCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.3

32.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

73.6

0.53

0.9

66.3

35.5

Minor 5ss

30.9

-2.2

3.2

40.5

38.7

Minor BPS

46.5

-0.2

2.1

59.68

45.2

Associated Gene:

Gene:

RIPOR1

Ensembl Gene ID:

ENSAPLG00000007203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020851

9355896 - 9374415

18520