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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9414704_9420297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9414704 - 9420297

Intron Length:

5594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTGGTGCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TCTAGCTGACCC

Flanking Amino Acid:

SEKKLEVAEQVPGCLGNQLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

66.1

0.36

54.9

45.8

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

45.6

-0.3

2.1

59.67

45.2

Associated Gene:

Gene:

LCAT

Ensembl Gene ID:

ENSAPLG00000006651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021547

9413803 - 9423132

9330