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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9420892_9421179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9420892 - 9421179

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TAATTCCCACCT

Flanking Amino Acid:

VEYLDQSKLAGYLHTLVQNL

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

81.4

0.71

0.7

76.7

25.3

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

45.6

-0.2

2.1

66.96

43.2

Associated Gene:

Gene:

LCAT

Ensembl Gene ID:

ENSAPLG00000006651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021547

9413803 - 9423132

9330

ENSAPLT00000006911

9417509 - 9423702

6194