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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9421276_9421541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9421276 - 9421541

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

CTCTCACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCTCTCTCACCC

Flanking Amino Acid:

AAPYDWRVGPQEQPEYFQNL

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

72.8

38.8

Major BPS

72.7

0.56

30.1

Major PPT

72.1

0.5

0.8

65.2

29.4

Minor 5ss

38.1

-1.3

3.3

53.7

43.8

Minor BPS

46.7

-0.2

1.8

55.1

43.3

Associated Gene:

Gene:

LCAT

Ensembl Gene ID:

ENSAPLG00000006651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021547

9413803 - 9423132

9330

ENSAPLT00000006911

9417509 - 9423702

6194