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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9421767_9422521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9421767 - 9422521

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTTTCTGACGA

Flanking Amino Acid:

SVKPLRVLASGDNQGIPLMS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

71.8

0.49

0.9

65.6

36.1

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

48.3

-0.1

64.34

42.1

Associated Gene:

Gene:

LCAT

Ensembl Gene ID:

ENSAPLG00000006651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021547

9413803 - 9423132

9330

ENSAPLT00000006911

9417509 - 9423702

6194