Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9424861_9429188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9424861 - 9429188

Intron Length:

4328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGCCTGATAT

Flanking Amino Acid:

RAASDRFVAQAIRIIHAVLE

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

62.4

0.28

1.2

56.8

47.6

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

53.8

0.2

1.9

78.31

43.5

Associated Gene:

Gene:

KIAA0895L

Ensembl Gene ID:

ENSAPLG00000006640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006886

9424387 - 9440406

16020