Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9438214_9438431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9438214 - 9438431

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGCGGG

5'SS Class:

major

3'SS Sequence:

CCACCCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACGAT

U12 Branch Point Sequence:

TTGTCCCCCACC

Flanking Amino Acid:

WLEGMLRHEIGTHYIRGVNN

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

47.1

Major BPS

48.7

-0

1.4

46.5

46.6

Major PPT

0.22

0.9

50.4

32.8

Minor 5ss

31.2

-2.2

3.2

38.7

46.4

Minor BPS

47.8

-0.1

2.3

67.41

43.9

Associated Gene:

Gene:

KIAA0895L

Ensembl Gene ID:

ENSAPLG00000006640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006886

9424387 - 9440406

16020