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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9479199_9479524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9479199 - 9479524

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTCCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

GAGCCCAGCACA

Flanking Amino Acid:

TTGWGRTNTNSNALAVRLQQ

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

63.1

41.5

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

85.3

0.79

0.7

30.8

Minor 5ss

38.5

-1.3

3.1

56.2

41.1

Minor BPS

41.2

-0.7

49.26

40.5

Associated Gene:

Gene:

CTRL

Ensembl Gene ID:

ENSAPLG00000008866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016111

9477024 - 9479977

2954

ENSAPLT00000009278

9478092 - 9479977

1886