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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9501105_9510054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9501105 - 9510054

Intron Length:

8950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAACAT

U12 Branch Point Sequence:

TTTGTGTGAAAC

Flanking Amino Acid:

LKGKYSYSGEPVRIYLLAAW

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

48.2

-0.1

1.2

55.4

40.4

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

45.9

-0.3

2.3

63.83

41.7

Associated Gene:

Gene:

PSKH1

Ensembl Gene ID:

ENSAPLG00000009622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047777

9499637 - 9512332

12696