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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9521844_9523213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9521844 - 9523213

Intron Length:

1370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTGGTTCTAACC

Flanking Amino Acid:

DLGTRTELKLNYLEEAVMHL

Intron Amino Acid Position:

1362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.2

36.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

83.3

0.75

0.7

80.8

24.4

Minor 5ss

32.3

-2

2.6

35.2

34.2

Minor BPS

52.8

0.07

1.8

65.89

40.3

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998