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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9531747_9532732_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9531747 - 9532732

Intron Length:
986

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAAGAG

5'SS Class:
major

3'SS Sequence:
TGTTCCTTCATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGTGAC

U12 Branch Point Sequence:
TGTTCCTTCATA

Flanking Amino Acid:
HDSQDASAEQSDHDDEVASL

Intron Amino Acid Position:
902

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
59.5
39.7

Major BPS
54.8
0.12
1.1
46.8
37.9

Major PPT
77.7
0.62
0.8
72.7
32.1

Minor 5ss
28.1
-2.5
3.5
37.6
47.2

Minor BPS
71.1
0.66
1.7
80.01
36.3

Associated Gene:

Gene:
EDC4

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9520651 - 9554648
33998

9521651 - 9554648
32998