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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9536216_9536640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9536216 - 9536640

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

GCCTGCTTGATT

Flanking Amino Acid:

CFSQRAVIVYRPSEDLTVSP

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

85.3

0.79

0.8

80.7

31.4

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

54.2

0.21

1.8

67.1

44.4

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009681

9521651 - 9554648

32998